STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107947107Protein SPA1-RELATED 2-like. (1054 aa)    
Predicted Functional Partners:
LOC107909196
Transcription factor HY5.
   
 0.931
LOC107890678
Eukaryotic translation initiation factor 2 subunit alpha-like.
   
 0.879
LOC107896487
Eukaryotic translation initiation factor 2 subunit alpha-like isoform X1.
   
 0.879
LOC107936421
Eukaryotic translation initiation factor 2 subunit alpha-like.
   
 0.879
LOC107946988
Eukaryotic translation initiation factor 2 subunit alpha-like.
   
 0.879
LOC107929100
Cryptochrome-1-like isoform X1.
    
 0.773
LOC107936243
Cryptochrome-1-like isoform X1.
    
 0.773
LOC107940541
Cryptochrome-1-like isoform X2.
    
 0.773
LOC107900827
Cryptochrome-1-like isoform X1.
    
 0.772
LOC107905111
Cryptochrome-1-like isoform X1.
    
 0.772
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.