STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107948646Probable LRR receptor-like serine/threonine-protein kinase At4g36180. (561 aa)    
Predicted Functional Partners:
LOC107913000
Probable LRR receptor-like serine/threonine-protein kinase At5g37450 isoform X1.
  
 
  0.514
LOC107898820
Probable LRR receptor-like serine/threonine-protein kinase At5g37450 isoform X1.
  
 
  0.509
LOC107919418
Leucine-rich repeat receptor-like protein FASCIATED EAR2.
  
     0.496
LOC107939502
Probable LRR receptor-like serine/threonine-protein kinase At3g47570.
  
 
   0.487
LOC107935007
Uncharacterized protein At4g06744-like.
  
     0.486
LOC107907721
Uncharacterized protein At4g06744-like.
  
     0.481
LOC107921726
Receptor-like protein 12.
  
    0.480
LOC107908890
Uncharacterized protein At4g06744-like.
  
     0.477
LOC107916560
Uncharacterized protein At4g06744-like.
  
     0.472
LOC107920923
Uncharacterized protein At4g06744-like.
  
     0.470
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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