STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107948651Uncharacterized protein LOC107948651. (735 aa)    
Predicted Functional Partners:
LOC107941108
Alpha-farnesene synthase-like.
  
     0.494
LOC107922451
Uncharacterized protein LOC107922451.
  
     0.493
LOC107952566
Uncharacterized protein LOC107952566.
  
     0.491
LOC107889914
Terpene synthase 10-like.
  
     0.490
LOC107892238
Terpene synthase 10-like.
  
     0.486
LOC107910319
Uncharacterized protein LOC107910319.
  
     0.485
LOC107903948
Probable terpene synthase 9.
  
     0.484
LOC107957903
Uncharacterized protein LOC107957903 isoform X1.
  
     0.484
LOC107935018
Filament-like plant protein 7.
  
     0.483
LOC107888718
Terpene synthase 10-like isoform X1.
  
     0.481
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.