STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107950151Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily. (190 aa)    
Predicted Functional Partners:
LOC107943835
Classical arabinogalactan protein 5.
    
 0.513
LOC107941893
Protein MRG1-like.
    
 0.437
LOC107923243
Probable WRKY transcription factor 27.
  
 
  0.430
LOC107904588
Probable WRKY transcription factor 27.
  
 
  0.428
LOC107896362
E3 ubiquitin-protein ligase KEG-like.
   
  0.420
LOC107897023
E3 ubiquitin-protein ligase KEG-like.
   
  0.420
LOC107915280
E3 ubiquitin-protein ligase KEG-like.
   
  0.420
LOC107927575
E3 ubiquitin-protein ligase KEG-like.
   
  0.420
LOC107889408
Probable WRKY transcription factor 74.
  
     0.406
LOC107930347
Probable WRKY transcription factor 14.
  
     0.405
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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