STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107951116CBL-interacting serine/threonine-protein kinase 9-like isoform X1. (135 aa)    
Predicted Functional Partners:
LOC107926470
Phosphoglucan phosphatase LSF1, chloroplastic-like.
    
 0.629
LOC107942327
Phosphoglucan phosphatase LSF1, chloroplastic-like.
    
 0.629
LOC107942600
Phosphoglucan phosphatase DSP4, amyloplastic-like isoform X1.
    
 0.629
LOC107959510
Phosphoglucan phosphatase DSP4, amyloplastic-like isoform X1.
    
 0.629
LOC107930476
Protein TIME FOR COFFEE-like.
   
 0.563
LOC107922480
Protein LST8 homolog isoform X2.
    
 0.524
LOC107900947
Beclin-1-like protein.
    
 0.421
LOC107938159
Beclin-1-like protein isoform X1.
    
 0.421
LOC107907182
Phosphoinositide 3-kinase regulatory subunit 4-like.
    
 0.420
LOC107958717
Phosphoinositide 3-kinase regulatory subunit 4-like isoform X1.
    
 0.420
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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