STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107951389Uncharacterized protein LOC107951389. (217 aa)    
Predicted Functional Partners:
LOC107940556
Uncharacterized protein LOC107940556.
  
     0.476
LOC107958328
Uncharacterized protein LOC107958328.
  
     0.470
LOC107947410
Uncharacterized protein LOC107947410.
  
     0.460
LOC107958320
Uncharacterized protein LOC107958320.
  
     0.456
LOC107911326
Uncharacterized protein LOC107911326.
  
     0.455
LOC107952771
Uncharacterized protein LOC107952771.
  
     0.455
LOC107937803
Uncharacterized protein LOC107937803.
  
     0.436
LOC107930566
Phytosulfokines-like.
  
     0.434
LOC107911325
Uncharacterized protein LOC107911325.
  
     0.430
LOC107932335
Uncharacterized protein LOC107932335.
  
     0.428
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (16%) [HD]