STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107951433Homeobox-leucine zipper protein ATHB-8-like. (153 aa)    
Predicted Functional Partners:
LOC107915844
mRNA-decapping enzyme subunit 2.
     
 0.662
LOC107921137
Uncharacterized protein At1g04910-like.
  
     0.525
LOC107939383
Uncharacterized protein At1g04910-like.
  
     0.524
LOC107908617
Uncharacterized protein At1g04910-like.
  
     0.523
LOC107917969
Uncharacterized protein At1g04910-like.
  
     0.523
LOC107925357
Uncharacterized protein At1g04910-like.
  
     0.523
LOC107933592
Uncharacterized protein LOC107933592.
  
     0.523
LOC107945252
Homeobox-leucine zipper protein HDG2-like.
  
     0.522
LOC107918389
Uncharacterized protein LOC107918389.
  
     0.519
LOC107925884
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
  
 0.518
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.