STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107951019GDSL esterase/lipase At1g29670-like; Belongs to the 'GDSL' lipolytic enzyme family. (364 aa)    
Predicted Functional Partners:
LOC107906927
60S ribosomal protein L39-3-like.
   
   0.421
LOC107948712
60S ribosomal protein L39.
   
   0.421
LOC107889489
60S ribosomal protein L21-1-like.
   
   0.413
LOC107889487
60S ribosomal protein L21-1-like.
   
   0.413
LOC107891242
60S ribosomal protein L21-1-like.
   
   0.413
LOC107891243
60S ribosomal protein L21-1-like.
   
   0.413
LOC107899215
60S ribosomal protein L21-1-like isoform X1.
   
   0.413
LOC107922438
60S ribosomal protein L21-1.
   
   0.413
rpl2
Ribosomal protein L2.
   
 
 0.407
LOC107920021
60S ribosomal protein L2, mitochondrial-like.
   
 
 0.407
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.