STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107951356Uncharacterized protein LOC107951356. (220 aa)    
Predicted Functional Partners:
LOC107911999
Uncharacterized protein LOC107911999.
  
     0.425
LOC107902692
(E,E)-geranyllinalool synthase-like.
  
     0.423
LOC107909349
Uncharacterized protein LOC107909349.
  
     0.420
LOC107915785
NAC domain-containing protein 74-like isoform X1.
  
     0.418
LOC107936315
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
  
     0.415
LOC107921338
18 kDa seed maturation protein-like.
  
   
 0.405
LOC107961079
Trihelix transcription factor ASIL2-like.
  
     0.403
LOC107914127
(E,E)-geranyllinalool synthase-like; Belongs to the terpene synthase family.
  
     0.401
LOC107921073
18 kDa seed maturation protein-like.
  
   
 0.401
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.