STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107951471Uncharacterized protein LOC107951471. (331 aa)    
Predicted Functional Partners:
LOC107951158
Uncharacterized protein LOC107951158.
  
     0.484
LOC107953081
BURP domain-containing protein 5-like.
  
     0.452
LOC107920016
Growth-regulating factor 4-like.
  
     0.448
LOC107951879
Growth-regulating factor 4-like isoform X1.
  
     0.446
LOC107956641
Transcription repressor OFP13-like.
  
     0.445
LOC107950614
Growth-regulating factor 4-like.
  
     0.436
LOC107948196
Uncharacterized protein LOC107948196.
  
     0.431
LOC107923334
Scarecrow-like protein 32; Belongs to the GRAS family.
  
     0.423
LOC107901182
Scarecrow-like protein 32; Belongs to the GRAS family.
  
     0.420
LOC107917975
Dehydrin ERD10-like; Belongs to the plant dehydrin family.
  
     0.420
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.