STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107951514Heat stress transcription factor A-7a-like. (447 aa)    
Predicted Functional Partners:
LOC107922480
Protein LST8 homolog isoform X2.
     
 0.537
LOC107896680
Heat shock factor-binding protein 1-like.
    
 0.425
LOC107910141
Heat shock factor-binding protein 1-like.
    
 0.425
LOC107912442
Heat shock factor-binding protein 1-like.
    
 0.425
LOC107924177
Heat shock factor-binding protein 1-like.
    
 0.425
LOC107926855
Heat shock factor-binding protein 1-like.
    
 0.425
LOC107920273
NAD-dependent protein deacetylase SRT1 isoform X1.
    
 0.417
LOC107937151
NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.
    
 0.417
LOC107959753
NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.
    
 0.417
LOC107896229
Heat shock 70 kDa protein 17-like.
    
 0.416
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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