STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107952508Probable 2-oxoglutarate-dependent dioxygenase AOP1.2; Belongs to the iron/ascorbate-dependent oxidoreductase family. (302 aa)    
Predicted Functional Partners:
LOC107939172
Gibberellin 3-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.526
LOC107929350
Probable iron/ascorbate oxidoreductase DDB_G0283291.
  
   
 0.524
LOC107956280
Protein SRG1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.524
LOC107934057
1-aminocyclopropane-1-carboxylate oxidase-like isoform X1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.523
LOC107934064
1-aminocyclopropane-1-carboxylate oxidase-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
   
 0.523
LOC107932651
Feruloyl CoA ortho-hydroxylase 2-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.516
LOC107889988
1-aminocyclopropane-1-carboxylate oxidase homolog 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.515
LOC107950928
Protein DOWNY MILDEW RESISTANCE 6-like.
  
     0.492
LOC107891900
1-aminocyclopropane-1-carboxylate oxidase homolog 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.489
LOC107891609
Gibberellin 2-beta-dioxygenase 8-like isoform X1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.488
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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