STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107953299Uncharacterized protein LOC107953299. (131 aa)    
Predicted Functional Partners:
LOC107948388
Uncharacterized protein LOC107948388.
  
 
   0.538
LOC107895057
Uncharacterized protein LOC107895057.
  
 
   0.536
LOC107921261
Uncharacterized protein LOC107921261.
  
 
   0.535
LOC107892950
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.529
LOC107917726
Translation initiation factor IF-2.
  
     0.527
LOC107914897
Uncharacterized protein LOC107914897.
  
     0.525
LOC107921279
Uncharacterized protein LOC107921279.
  
     0.524
LOC107935525
Uncharacterized protein LOC107935525.
  
     0.523
LOC107947415
Uncharacterized protein LOC107947415.
  
     0.522
LOC107887562
Glutathione S-transferase U7-like.
  
    0.520
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.