STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107953759Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (470 aa)    
Predicted Functional Partners:
LOC107895119
UDP-glucuronate 4-epimerase 5-like.
     
  0.650
LOC107900845
UDP-glucuronate 4-epimerase 3 isoform X1.
     
  0.650
LOC107909188
UDP-glucuronate 4-epimerase 1-like.
     
  0.650
LOC107911908
UDP-glucuronate 4-epimerase 3-like.
     
  0.650
LOC107911583
UDP-glucuronate 4-epimerase 3-like.
     
  0.650
LOC107915118
UDP-glucuronate 4-epimerase 6-like.
     
  0.650
LOC107914735
UDP-glucuronate 4-epimerase 6-like.
     
  0.650
LOC107928291
UDP-glucuronate 4-epimerase 1-like.
     
  0.650
LOC107931294
UDP-glucuronate 4-epimerase 5-like.
     
  0.650
LOC107930461
UDP-glucuronate 4-epimerase 3-like.
     
  0.650
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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