STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107954037TBC1 domain family member 2A-like. (398 aa)    
Predicted Functional Partners:
LOC107893530
Septum-promoting GTP-binding protein 1-like.
   
 0.678
LOC107918422
Septum-promoting GTP-binding protein 1-like isoform X1.
   
 0.678
LOC107918879
Septum-promoting GTP-binding protein 1-like.
   
 0.678
LOC107937857
Septum-promoting GTP-binding protein 1-like.
   
 0.678
LOC107943265
Septum-promoting GTP-binding protein 1-like isoform X1.
   
 0.678
LOC107946333
Septum-promoting GTP-binding protein 1-like.
   
 0.678
LOC107896362
E3 ubiquitin-protein ligase KEG-like.
    
 
 0.642
LOC107897023
E3 ubiquitin-protein ligase KEG-like.
    
 
 0.642
LOC107915280
E3 ubiquitin-protein ligase KEG-like.
    
 
 0.642
LOC107927575
E3 ubiquitin-protein ligase KEG-like.
    
 
 0.642
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.