STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107955392Uncharacterized protein LOC107955392. (327 aa)    
Predicted Functional Partners:
LOC107921674
Uncharacterized protein LOC107921674.
  
     0.494
LOC107887788
Uncharacterized protein LOC107887788.
  
     0.461
LOC107921557
Uncharacterized protein LOC107921557.
  
     0.458
LOC107940402
Uncharacterized protein LOC107940402.
  
     0.452
LOC107921666
Uncharacterized protein LOC107921666.
  
     0.449
LOC107907940
Uncharacterized protein LOC107907940.
  
     0.422
LOC107957275
Uncharacterized protein LOC107957275.
  
     0.421
LOC107908106
Uncharacterized mitochondrial protein AtMg00860-like.
  
     0.408
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.