STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107956099Uncharacterized protein LOC107956099. (363 aa)    
Predicted Functional Partners:
LOC107955144
Uncharacterized protein LOC107955144.
  
     0.524
LOC107963102
Uncharacterized protein LOC107963102.
  
     0.484
LOC107900698
Uncharacterized protein LOC107900698.
  
     0.470
LOC107929523
Uncharacterized protein LOC107929523.
  
     0.468
LOC107941142
Uncharacterized protein LOC107941142.
  
     0.467
LOC107915376
Uncharacterized protein LOC107915376.
  
     0.465
LOC107941139
Uncharacterized protein LOC107941139.
  
     0.463
LOC107956019
Uncharacterized protein LOC107956019.
  
     0.458
LOC107900256
Uncharacterized protein LOC107900256.
  
     0.453
LOC107942976
Uncharacterized protein LOC107942976.
  
     0.447
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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