STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107956121Uncharacterized protein LOC107956121. (262 aa)    
Predicted Functional Partners:
LOC107916385
Uncharacterized protein LOC107916385.
  
     0.520
LOC107908302
Uncharacterized protein LOC107908302.
  
     0.501
LOC107963102
Uncharacterized protein LOC107963102.
  
     0.481
LOC107910818
Uncharacterized protein LOC107910818.
  
     0.450
LOC107911074
Uncharacterized protein LOC107911074.
  
     0.448
LOC107901324
Zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1.
  
     0.446
LOC107901323
Zinc finger BED domain-containing protein DAYSLEEPER-like.
  
     0.446
LOC107912346
Zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1.
  
     0.446
LOC107956405
Uncharacterized protein LOC107956405.
  
     0.446
LOC107941736
Zinc finger BED domain-containing protein DAYSLEEPER-like.
  
     0.445
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.