STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107956236Uncharacterized protein LOC107956236. (232 aa)    
Predicted Functional Partners:
LOC107895442
Uncharacterized protein LOC107895442.
  
     0.508
LOC107910818
Uncharacterized protein LOC107910818.
  
     0.507
LOC107900698
Uncharacterized protein LOC107900698.
  
     0.501
LOC107952198
Uncharacterized protein LOC107952198.
  
     0.495
LOC107948806
Uncharacterized protein LOC107948806.
  
     0.487
LOC107891509
Protein FAR1-RELATED SEQUENCE 11.
  
     0.477
LOC107943769
Uncharacterized protein LOC107943769.
  
     0.475
LOC107910518
Uncharacterized protein LOC107910518.
  
     0.472
LOC107907647
Uncharacterized protein LOC107907647.
  
     0.471
LOC107963050
Uncharacterized protein LOC107963050.
  
     0.470
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.