STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107957686Putative serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (366 aa)    
Predicted Functional Partners:
LOC107943835
Classical arabinogalactan protein 5.
    
 0.528
LOC107889586
Phosphoenolpyruvate carboxylase kinase 1-like; Belongs to the protein kinase superfamily.
  
 
  0.492
LOC107926832
Phosphoenolpyruvate carboxylase kinase 1-like; Belongs to the protein kinase superfamily.
  
 
  0.490
LOC107940513
Mitogen-activated protein kinase kinase kinase YODA-like; Belongs to the protein kinase superfamily.
  
 
  0.469
LOC107955191
Uncharacterized protein LOC107955191 isoform X1.
    
 0.464
LOC107957302
Uncharacterized protein LOC107957302.
    
 0.464
LOC107956003
Mitogen-activated protein kinase kinase kinase 1-like.
  
 
  0.457
LOC107889431
Uncharacterized protein LOC107889431.
    
 0.455
LOC107891347
Uncharacterized protein LOC107891347.
    
 0.455
LOC107906173
Nudix hydrolase 9-like.
      
 0.426
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.