Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107957106Two-component response regulator-like PRR37 isoform X1. (752 aa)    
Predicted Functional Partners:
LOC107910471
Protein GIGANTEA isoform X1.
   
 
 0.844
LOC107914084
Protein GIGANTEA-like.
   
 
 0.844
LOC107951610
Protein GIGANTEA-like isoform X1.
   
 
 0.844
LOC107960109
DELLA protein RGA-like; Belongs to the GRAS family.
      
 0.728
LOC107896595
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 
 0.671
LOC107916208
Phytochrome B apoprotein.
    
 
 0.671
LOC107917931
Phosphoglycerate mutase-like protein 1.
      
 0.664
LOC107919242
Phosphoglycerate mutase-like protein 1.
      
 0.664
LOC107919612
Phosphoglycerate mutase-like protein 1.
      
 0.664
LOC107941792
Phosphoglycerate mutase-like protein 1.
      
 0.664
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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