STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107958452Zinc finger protein 1-like. (271 aa)    
Predicted Functional Partners:
LOC107894279
Transcription factor bHLH95-like isoform X1.
      
 0.495
LOC107889644
Transcription factor EMB1444-like isoform X1.
  
     0.461
LOC107891072
Transcription factor EMB1444-like.
  
     0.457
LOC107948671
Basic leucine zipper 24-like isoform X1.
  
     0.446
LOC107911022
Uncharacterized protein LOC107911022.
  
     0.444
LOC107915253
Uncharacterized protein LOC107915253.
  
     0.436
LOC107960345
Basic leucine zipper 19-like isoform X1.
  
     0.435
LOC107959624
Uncharacterized protein LOC107959624.
  
     0.433
LOC107932261
Uncharacterized protein LOC107932261.
  
     0.432
LOC107893783
Uncharacterized protein LOC107893783 isoform X1.
  
     0.431
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.