STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107959172Transcription factor DIVARICATA-like. (310 aa)    
Predicted Functional Partners:
LOC107893512
Coiled-coil domain-containing protein 22-like isoform X1.
    
 0.543
LOC107919927
Coiled-coil domain-containing protein 22 homolog.
    
 0.543
LOC107896229
Heat shock 70 kDa protein 17-like.
   
 0.454
LOC107915754
Heat shock 70 kDa protein 17-like.
   
 0.454
LOC107924006
Heat shock 70 kDa protein 17-like.
   
 0.454
LOC107955358
Heat shock 70 kDa protein 17-like.
   
 0.454
LOC107905726
BTB/POZ domain-containing protein At2g30600-like.
   
 
  0.429
LOC107905766
BTB/POZ domain-containing protein At2g30600-like.
   
 
  0.429
LOC107935533
Protein RBL-like.
    
  0.415
LOC107954465
Protein RBL-like.
    
  0.415
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.