STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10795953130S ribosomal protein 2, chloroplastic-like. (245 aa)    
Predicted Functional Partners:
rpl2-2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
   
   0.837
LOC107887169
30S ribosomal protein 3, chloroplastic-like.
    
 
 0.820
LOC107891562
30S ribosomal protein S31, chloroplastic-like.
    
 
 0.820
LOC107905182
50S ribosomal protein 6, chloroplastic-like.
    
 
 0.820
LOC107909453
Ribosome-binding factor PSRP1, chloroplastic-like.
    
 
 0.820
LOC107916675
30S ribosomal protein 3, chloroplastic-like.
    
 
 0.820
LOC107921058
50S ribosomal protein 5, chloroplastic-like.
    
 
 0.820
LOC107935486
50S ribosomal protein 5, chloroplastic-like isoform X1.
    
 
 0.820
LOC107948238
Ribosome-binding factor PSRP1, chloroplastic-like.
    
 
 0.820
LOC107958049
30S ribosomal protein S31, chloroplastic-like.
    
 
 0.820
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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