STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107960593Putative disease resistance protein At3g14460. (370 aa)    
Predicted Functional Partners:
LOC107920691
Calmodulin-binding protein 25-like.
  
   0.518
LOC107918007
Protein BASIC PENTACYSTEINE6-like isoform X1.
  
     0.503
LOC107922158
Protein BASIC PENTACYSTEINE6-like.
  
     0.503
LOC107950496
Transcription factor bHLH93-like isoform X1.
  
     0.483
LOC107919512
VQ motif-containing protein 17-like.
  
     0.480
LOC107943410
Transcription factor bHLH93-like isoform X1.
  
     0.480
LOC107898760
Transcription factor bHLH61-like.
  
     0.479
LOC107888852
Uncharacterized protein At3g27210-like.
  
     0.476
LOC107892173
Uncharacterized protein At3g27210-like.
  
     0.468
LOC107891842
Transcription factor bHLH61-like.
  
     0.466
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.