STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107961023Protein SPIRRIG isoform X1. (3581 aa)    
Predicted Functional Partners:
LOC107907561
Uncharacterized protein LOC107907561.
   
  
 0.662
LOC107912852
Uncharacterized protein LOC107912852.
   
  
 0.662
LOC107938242
Guanine nucleotide exchange factor SPIKE 1-like; Belongs to the DOCK family.
  
 
 0.650
LOC107946479
Guanine nucleotide exchange factor SPIKE 1-like; Belongs to the DOCK family.
  
 
 0.650
LOC107940278
Peptidylprolyl isomerase.
      
 0.619
LOC107890848
Guanine nucleotide-binding protein subunit beta-like protein.
    
 0.614
LOC107899050
Guanine nucleotide-binding protein subunit beta-like protein.
    
 0.614
LOC107913196
Ribosomal RNA large subunit methyltransferase I-like isoform X1.
    
 0.614
LOC107931035
Guanine nucleotide-binding protein subunit beta-like protein.
    
 0.614
LOC107941463
Guanine nucleotide-binding protein subunit beta-like protein.
    
 0.614
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.