STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107961277Dynein light chain. (111 aa)    
Predicted Functional Partners:
LOC107931469
Uncharacterized protein LOC107931469.
    
 0.733
LOC107923168
Dynein light chain.
  
  
  0.698
LOC107957704
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.660
LOC107916519
Phosphatidylinositol 3-kinase, root isoform-like; Belongs to the PI3/PI4-kinase family.
     
 0.612
LOC107922365
Phosphatidylinositol 3-kinase, root isoform; Belongs to the PI3/PI4-kinase family.
     
 0.612
LOC107917027
Uncharacterized protein LOC107917027 isoform X1.
  
  
 
0.601
LOC107932672
Dynein light chain.
  
  
 
0.594
LOC107961019
Dynein light chain.
  
  
 
0.592
LOC107938715
Dynein light chain.
  
  
 
0.589
LOC107938232
Uncharacterized protein LOC107938232.
  
  
 
0.584
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.