STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107961446Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (957 aa)    
Predicted Functional Partners:
LOC107945125
Allene oxide synthase-like; Belongs to the cytochrome P450 family.
   
 
 0.685
LOC107945182
Allene oxide synthase-like; Belongs to the cytochrome P450 family.
   
 
 0.685
LOC107949156
Allene oxide synthase-like; Belongs to the cytochrome P450 family.
   
 
 0.685
LOC107899049
Alpha-dioxygenase 2-like.
   
 0.683
LOC107900136
Alpha-dioxygenase 1-like.
   
 0.683
LOC107925999
Alpha-dioxygenase 1-like.
   
 0.683
LOC107938825
Alpha-dioxygenase 1-like.
   
 0.683
LOC107959828
Alpha-dioxygenase 1-like.
   
 0.683
LOC107894336
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
  
  
 
0.679
LOC107894329
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
  
  
 
0.679
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.