STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107962244Uncharacterized protein LOC107962244. (562 aa)    
Predicted Functional Partners:
LOC107918230
Mannosyl-oligosaccharide glucosidase GCS1-like.
   
  
 0.828
LOC107922345
Mannosyl-oligosaccharide glucosidase GCS1-like.
   
  
 0.828
LOC107931828
Cytosolic endo-beta-N-acetylglucosaminidase 1-like isoform X1.
  
  
 0.775
LOC107939385
Cytosolic endo-beta-N-acetylglucosaminidase 1-like isoform X1.
  
  
 0.775
LOC107955208
Cytosolic endo-beta-N-acetylglucosaminidase 1-like.
  
  
 0.775
LOC107955207
Cytosolic endo-beta-N-acetylglucosaminidase 1-like.
  
  
 0.775
LOC107957163
Cytosolic endo-beta-N-acetylglucosaminidase 1-like.
  
  
 0.775
LOC107943675
Cytidylate kinase-like.
  
    0.750
LOC107886212
Protein NBR1 homolog.
   
 
 0.739
LOC107912046
Protein NBR1 homolog.
   
 
 0.739
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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