STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107962446Uncharacterized protein LOC107962446. (340 aa)    
Predicted Functional Partners:
LOC107922217
F-box/kelch-repeat protein At5g42350-like.
  
     0.532
LOC107945241
F-box/kelch-repeat protein At5g42350-like.
  
     0.531
LOC107895537
Uncharacterized protein LOC107895537.
  
     0.523
LOC107915317
Uncharacterized protein LOC107915317.
  
     0.522
LOC107921541
Uncharacterized protein LOC107921541.
  
     0.522
LOC107895985
Uncharacterized protein LOC107895985.
  
     0.521
LOC107914770
Uncharacterized protein LOC107914770.
  
     0.521
LOC107921446
Uncharacterized protein LOC107921446.
  
     0.521
LOC107891133
Uncharacterized protein LOC107891133 isoform X1.
  
     0.518
LOC107930315
Uncharacterized protein LOC107930315 isoform X1.
  
     0.517
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.