STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107962125Abscisic acid receptor PYL4-like. (215 aa)    
Predicted Functional Partners:
LOC107955136
Protein phosphatase 2C 37-like.
    
 0.916
LOC107906080
Protein phosphatase 2C 16-like.
    
 0.761
LOC107907032
Probable protein phosphatase 2C 53.
    
 0.761
LOC107932251
Protein phosphatase 2C 77-like.
    
 0.761
LOC107932876
Protein phosphatase 2C 77-like isoform X1.
    
 0.761
LOC107958410
Protein phosphatase 2C 16-like.
    
 0.761
LOC107958856
Probable protein phosphatase 2C 53.
    
 0.761
LOC107906580
Probable protein phosphatase 2C 24.
    
  0.737
LOC107949971
Probable protein phosphatase 2C 24.
    
  0.737
LOC107959142
Probable protein phosphatase 2C 24.
    
  0.737
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.