STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107962137Putative cyclic nucleotide-gated ion channel 15. (708 aa)    
Predicted Functional Partners:
LOC107942093
LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1.
   
 
  0.656
LOC107886446
Putative receptor-like protein kinase At3g47110 isoform X1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
     
  0.650
LOC107901844
LRR receptor-like serine/threonine-protein kinase FLS2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
     
  0.650
LOC107904335
Probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
     
  0.650
LOC107928038
LRR receptor-like serine/threonine-protein kinase EFR; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
     
  0.650
LOC107934650
Probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
     
  0.650
LOC107961798
LRR receptor-like serine/threonine-protein kinase FLS2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
     
  0.650
LOC107891163
Cation/calcium exchanger 1-like; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.400
LOC107913611
Cation/calcium exchanger 1-like; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.400
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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