STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107962753Methyltransferase-like protein 5. (213 aa)    
Predicted Functional Partners:
LOC107900868
Multifunctional methyltransferase subunit TRM112-like protein At1g22270.
    
 
 0.961
LOC107920365
HD domain-containing protein 2-like isoform X1.
   
    0.663
LOC107925439
HD domain-containing protein 2-like isoform X1.
   
    0.663
LOC107957134
HD domain-containing protein 2-like.
   
    0.663
LOC107896676
hemK methyltransferase family member 2-like.
     
 0.584
LOC107946955
Putative transferase At4g12130, mitochondrial.
      
 0.562
LOC107959248
Release factor glutamine methyltransferase.
     
 0.545
LOC107919859
Probable 18S rRNA (Guanine-N(7))-methyltransferase.
   
  
 0.529
LOC107926246
Probable 18S rRNA (Guanine-N(7))-methyltransferase.
   
  
 0.529
LOC107932657
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
      
 0.513
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.