STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107941184Pathogenesis-related genes transcriptional activator PTI5-like. (203 aa)    
Predicted Functional Partners:
LOC107962153
Pathogenesis-related genes transcriptional activator PTI5-like.
  
  
 
0.900
LOC107897711
Phenylalanine ammonia-lyase.
      
 0.567
LOC107901087
Phenylalanine ammonia-lyase.
      
 0.567
LOC107896459
Mitochondrial import receptor subunit TOM20-like isoform X1.
  
     0.522
LOC107896705
Mitochondrial import receptor subunit TOM20-like isoform X1.
  
     0.521
LOC107888752
Mitochondrial import receptor subunit TOM20-like.
  
     0.501
LOC107912098
Protein MIS12 homolog.
      
 0.497
LOC107916234
Mitochondrial import receptor subunit TOM20-like.
  
     0.496
LOC107895704
Mitochondrial import receptor subunit TOM20-like.
  
     0.492
LOC107892160
Mitochondrial import receptor subunit TOM20-like.
  
     0.490
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.