STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107905808E6-3 protein kinase. (241 aa)    
Predicted Functional Partners:
LOC107888583
Polypyrimidine tract-binding protein homolog 1-like isoform X1.
      
 0.698
LOC107890457
Polypyrimidine tract-binding protein homolog 1-like isoform X1.
      
 0.698
LOC107917923
Polypyrimidine tract-binding protein homolog 2-like.
      
 0.698
LOC107929595
Polypyrimidine tract-binding protein homolog 2-like.
      
 0.698
LOC107937415
Polypyrimidine tract-binding protein homolog 1-like isoform X1.
      
 0.698
LOC107945949
Polypyrimidine tract-binding protein homolog 2-like isoform X1.
      
 0.698
LOC107947257
Polypyrimidine tract-binding protein homolog 2-like.
      
 0.698
LOC107949175
Polypyrimidine tract-binding protein homolog 1-like isoform X1.
      
 0.698
LOC107910463
Polypyrimidine tract-binding protein homolog 3.
      
 0.696
LOC107888529
Ubiquitin-like domain-containing CTD phosphatase 1 isoform X1.
      
 0.441
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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