STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hupCNi/Fe-hydrogenase B-type cytochrome HupC; Identified by sequence similarity; putative. (242 aa)    
Predicted Functional Partners:
hupS
Uptake hydrogenase small subunit precursor HupS; Identified by sequence similarity; putative.
 
 0.999
hupL
Uptake hydrogenase large subunit HupL; Identified by sequence similarity; putative; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.999
hupK
Hydrogenase expression/formation protein HupK; Identified by sequence similarity; putative.
 
 0.999
hupD
Hydrogenase expression/formation protein HupD; Identified by sequence similarity; putative.
 
 
 0.996
ENN88343.1
Hypothetical protein.
 
  
 0.982
hupF
Hydrogenase expression/formation protein HupF; Identified by sequence similarity; putative.
 
  
 0.916
sdhB
Succinate dehydrogenase iron-sulfur protein; Identified by sequence similarity; putative; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
  0.766
ENN84596.1
Fumarate reductase/succinate dehydrogenase flavoprotein; Identified by sequence similarity; putative.
   
 
  0.728
sdhA
Succinate dehydrogenase flavoprotein subunit; Identified by sequence similarity; putative; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
  0.728
hypA
Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.706
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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