Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENN89338.1ABC-type transport system, periplasmic component/surface lipoprotein; Identified by sequence similarity; putative. (391 aa)    
Predicted Functional Partners:
ENN89340.1
Sugar ABC transporter, permease protein; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.985
ENN89339.1
ABC transporter permease protein; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.973
ENN89341.1
Putative sugar ABC transporter, ATP-binding protein; Identified by sequence similarity; putative.
 
 
 0.952
ENN87067.1
ABC transporter permease protein; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.948
ENN87065.1
ABC transporter; Identified by sequence similarity; putative.
 
 
 0.945
ENN87066.1
Inner-membrane translocator; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.909
ENN84558.1
Inner-membrane translocator; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.903
ENN84556.1
Putative sugar ABC transporter, ATP-binding protein; Identified by sequence similarity; putative.
 
 
 0.875
ENN84557.1
Putative transmembrane permease component of ABC transporter; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.838
ENN89342.1
Putative isochorismatase hydrolase protein; Identified by sequence similarity; putative.
 
     0.662
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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