Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
kdgRTranscription regulator protein; Identified by sequence similarity; putative. (232 aa)    
Predicted Functional Partners:
ENN88469.1
Urea amidolyase/ putative allophanate hydrolase subunit 1; Identified by sequence similarity; putative.
  
    0.746
ENN86483.1
Putative allophanate hydrolase subunit 2; Identified by sequence similarity; putative.
  
    0.731
ENN87508.1
Hypothetical protein.
  
     0.673
ENN89806.1
2-oxoisovalerate dehydrogenase beta subunit protein; Identified by sequence similarity; putative.
     
  0.667
ENN88975.1
Putative KHG-KDPG bifunctional aldolase; Identified by sequence similarity; putative.
 
   
 0.634
ENN85478.1
Putative transcriptional regulator protein; Identified by sequence similarity; putative.
  
     0.624
ENN86824.1
Transcriptional regulator; Identified by sequence similarity; putative.
  
    0.590
hmgA
Hypothetical protein; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
    
 0.546
hutI
Imidazolone-5-propionate hydrolase; Identified by sequence similarity; putative.
    
 0.541
dgoK
2-dehydro-3-deoxygalactokinase; Identified by sequence similarity; putative.
 
     0.540
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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