STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rluBPseudouridylate synthase; Identified by sequence similarity; putative; Belongs to the pseudouridine synthase RsuA family. (672 aa)    
Predicted Functional Partners:
ENN87995.1
Putative EngA GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.908
cmk
Cytidylate kinase protein; Identified by sequence similarity; putative.
 
  
 0.893
ENN88960.1
Putative methylase protein; Identified by sequence similarity; putative.
 
     0.836
ENN86956.1
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
  
 0.806
ENN87181.1
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
 
 0.802
ENN89806.1
2-oxoisovalerate dehydrogenase beta subunit protein; Identified by sequence similarity; putative.
  
 
 0.774
xthA
Exonuclease III; Identified by sequence similarity; putative.
  
    0.753
ENN86925.1
Hypothetical protein.
  
    0.753
ENN84879.1
Exodeoxyribonuclease III protein; Identified by sequence similarity; putative.
  
    0.753
ENN87651.1
Putative endonuclease/exonuclease/phosphatase family protein; Identified by sequence similarity; putative.
  
    0.753
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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