Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENN85759.1Transcriptional regulator, LacI family; Identified by sequence similarity; putative. (351 aa)    
Predicted Functional Partners:
ENN84634.1
Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
    
 
 0.775
ENN88428.1
Putative LacI family transcriptional regulator; Identified by sequence similarity; putative.
  
     0.770
ENN88233.1
Transcriptional regulator protein, LacI family utilization system Gnt-I transcriptional repressor; Identified by sequence similarity; putative.
  
     0.768
gltB
Glutamate synthase, large subunit; Identified by sequence similarity; putative.
    
 
 0.743
ENN84343.1
Phosphocarrier protein NPr; Identified by sequence similarity; putative.
 
 
 
 0.692
pheT
phenylalanyl-tRNA synthetase protein, beta subunit; Identified by sequence similarity; putative; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.533
ribA
Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.532
ribB-2
Hypothetical protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
    
   0.532
ENN87481.1
Transcriptional regulator, LacI family; Identified by sequence similarity; putative.
  
 
  0.530
ENN87714.1
Bacterial glucose/galactose transporter; Identified by sequence similarity; putative.
 
     0.465
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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