Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENN85763.1Putative transcriptional regulatory protein; Identified by sequence similarity; putative. (335 aa)    
Predicted Functional Partners:
ENN85761.1
Oxygenase; Identified by sequence similarity; putative.
 
     0.797
ENN85762.1
Hypothetical protein.
       0.701
ENN87227.1
Pyruvate ferredoxin/flavodoxin oxidoreductase Metabolism; Identified by sequence similarity; putative.
  
  
  0.696
ENN87224.1
Cyclase family protein; Identified by sequence similarity; putative.
  
     0.662
ENN87228.1
Indolepyruvate ferredoxin oxidoreductase alpha subunit; Identified by sequence similarity; putative.
  
     0.640
gltB
Glutamate synthase, large subunit; Identified by sequence similarity; putative.
     
 0.630
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.534
trpE
Putative anthralinate synthase protein; Identified by sequence similarity; putative.
  
  
 0.479
ENN88581.1
Helix-turn-helix- domain containing protein; Identified by sequence similarity; putative.
  
     0.477
ENN86333.1
Malate dehydrogenase (oxaloacetate-decarboxylating) phosphate acetyltransferase; Identified by sequence similarity; putative; Belongs to the malic enzymes family.
     
 0.469
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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