Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fixOCbb3-type cytochrome c oxidase subunit II; Identified by sequence similarity; putative. (243 aa)    
Predicted Functional Partners:
fixN
Cbb3-type cytochrome c oxidase subunit I; Identified by sequence similarity; putative; Belongs to the heme-copper respiratory oxidase family.
 0.999
fixP
Cbb3-type cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.999
fixQ
Cbb3-type cytochrome c oxidase component; Identified by sequence similarity; putative.
 
 
 0.997
fixG
Cbb3-type cytochrome c oxidase accessory protein FixG; Identified by sequence similarity; putative.
 
  
 0.992
fixH
Nitrogen fixation protein FixH; Identified by sequence similarity; putative.
 
 
 0.966
fixS
Nitrogen fixation protein FixS; Identified by sequence similarity; putative.
 
 
 0.966
ENN83930.1
Putative cytochrome c; Identified by sequence similarity; putative.
  
 0.949
cycG
Identified by sequence similarity; putative.
  
 0.949
ENN84770.1
Outer membrane protein, OmpW family; Identified by sequence similarity; putative.
 
    0.904
ENN89063.1
Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.901
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
Server load: low (16%) [HD]