Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN88502.1Hypothetical protein. (1246 aa)    
Predicted Functional Partners:
ENN88503.1
Hypothetical protein.
 
 
 0.961
ENN88501.1
Putative transcriptional regulator; Identified by sequence similarity; putative.
 
     0.952
ENN88500.1
Hypothetical protein.
 
 
 
 0.905
ENN88504.1
Phage transcriptional regulator; Identified by sequence similarity; putative.
 
     0.827
ENN88497.1
Helicase domain-containing protein Genetic Information Processing; Identified by sequence similarity; putative.
 
   0.825
polA
DNA-directed DNA polymerase, DNA polymerase I protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.822
ENN88496.1
Alkaline phosphatase domain-containing protein; Identified by sequence similarity; putative.
 
     0.809
ENN88498.1
Hypothetical protein.
 
     0.809
ENN88495.1
Hypothetical protein.
 
     0.806
rnhB
Ribonuclease HII protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
  
 0.595
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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