STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN85552.1T4SS VirB10; Identified by sequence similarity; putative. (391 aa)    
Predicted Functional Partners:
ENN85551.1
T4SS VirB9; Identified by sequence similarity; putative.
 
 0.999
ENN86607.1
Conjugal transfer protein TrbG; Identified by sequence similarity; putative.
 
 0.999
ENN85550.1
Transport secretion system IV protein, VirB8; Identified by sequence similarity; putative.
 
  
 0.993
ENN85549.1
T4SS VirB6; Identified by sequence similarity; putative.
 
 
 0.986
ENN85547.1
T4SS VirB4; Identified by sequence similarity; putative.
 
 
 0.986
ENN86611.1
Conjugal transfer protein E; Identified by sequence similarity; putative.
 
 
 0.982
ENN85553.1
T4SS VirB11; Identified by sequence similarity; putative.
 
  
 0.976
ENN86608.1
Conjugal transfer protein TrbF; Identified by sequence similarity; putative.
 
  
 0.915
trbL
Putative conjugal transfer protein trbL; Identified by sequence similarity; putative.
 
  
 0.912
ENN85546.1
T4SS VirB3; Identified by sequence similarity; putative.
  
  
 0.903
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.