Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN85456.1Two component transcriptional regulator, LuxR family; Identified by sequence similarity; putative. (308 aa)    
Predicted Functional Partners:
ENN84664.1
Two-component sensor histidine kinase protein; Identified by sequence similarity; putative.
 
 0.997
ENN85457.1
Integral membrane sensor hybrid histidine kinase; Identified by sequence similarity; putative.
 
0.994
ENN88028.1
Putative two-component sensor histidine kinase transcriptional regulatory protein; Identified by sequence similarity; putative.
0.993
ENN89202.1
Putative two-component sensor histidine kinase/response regulator hybrid protein; Identified by sequence similarity; putative.
 0.986
ENN86330.1
Putative two-component sensor histidine kinase/response regulator hybrid protein; Identified by sequence similarity; putative.
 0.973
ENN85665.1
Diguanylate cyclase/phosphodiesterase; Identified by sequence similarity; putative.
 
 0.972
ENN86218.1
Multi-sensor signal transduction histidine kinase kinase PleC; Identified by sequence similarity; putative.
 0.958
ENN88878.1
Putative two-component sensor histidine kinase protein kinase PleC; Identified by sequence similarity; putative.
 
 0.957
ENN84341.1
Putative two-component sensor histidine kinase protein; Identified by sequence similarity; putative.
  
 0.955
ENN88971.1
Two-component sensor histidine kinase protein; Identified by sequence similarity; putative.
   
 0.954
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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