Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
idnKGluconate kinase IdnK; Identified by sequence similarity; putative. (178 aa)    
Predicted Functional Partners:
ENN89228.1
Putative phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 0.957
gntZ
Putative 6-phosphogluconate dehydrogenase,decarboxylating; Identified by sequence similarity; putative.
  
 0.893
ENN86467.1
Hypothetical protein.
       0.795
garR
3-hydroxyisobutyrate dehydrogenase; Identified by sequence similarity; putative.
       0.773
ENN87863.1
Putative gluconate 5-dehydrogenase; Identified by sequence similarity; putative.
     
  0.717
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.700
pgl
6-phosphogluconolactonase protein; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.699
cysC
Adenylyl-sulfate kinase NodQ2; Catalyzes the synthesis of activated sulfate.
     
  0.635
ENN84795.1
Sulfate adenylyltransferase subunit 1, NodQ1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
  0.635
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Identified by sequence similarity; putative.
     
  0.619
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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