STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtBPhytoene synthase protein; Identified by sequence similarity; putative. (286 aa)    
Predicted Functional Partners:
ENN87222.1
Identified by sequence similarity; putative.
  
 
 0.958
ENN87225.1
Hypothetical protein.
  
 
 0.958
ENN87910.1
Hypothetical protein.
  
  
 0.928
nuoC
NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
  
 0.915
ENN85678.1
Sterol desaturase; Identified by sequence similarity; putative.
  
 0.907
ENN89805.1
Hypothetical protein.
  
 0.907
ENN84370.1
Hypothetical protein.
  
 0.907
ENN88645.1
Transmembrane protein; Identified by sequence similarity; putative.
  
 0.907
ENN86702.1
Sterol desaturase; Identified by sequence similarity; putative.
  
 0.907
ENN83929.1
Amine oxidase precursor; Identified by sequence similarity; putative.
   
 
 0.905
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.