Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ENN86893.1HlyD family secretion protein; Identified by sequence similarity; putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (331 aa)    
Predicted Functional Partners:
ENN86892.1
Fusaric acid resistance protein region; Identified by sequence similarity; putative.
 
 
 0.972
ENN86891.1
Hypothetical protein.
 
   
 0.861
nodT
Nodulation protein; Identified by sequence similarity; putative.
 
 0.817
ENN86718.1
Type I secretion outer membrane protein, TolC; Identified by sequence similarity; putative.
  
 0.793
ENN84937.1
Outer membrane efflux family protein precursor; Identified by sequence similarity; putative.
  
 0.793
ENN88773.1
Hypothetical protein.
 
 
 0.779
ENN86438.1
Type I secretion system ATPase; Identified by sequence similarity; putative.
  
 0.751
ENN84936.1
Hypothetical protein.
  
 
 0.716
ENN85496.1
Hypothetical protein.
   
  0.596
hlyD
Secretion protein; Identified by sequence similarity; putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.567
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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