Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ENN85897.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
ENN85896.1
Agmatinase; Identified by sequence similarity; putative; Belongs to the arginase family.
       0.777
ENN89029.1
Ferredoxin oxidoreductase protein; Identified by sequence similarity; putative.
     
  0.628
ENN85366.1
Phosophohydrolase; Identified by sequence similarity; putative.
     
  0.628
ENN84720.1
Oxidoreductase FAD-binding protein domain protein; Identified by sequence similarity; putative.
     
  0.628
ENN88592.1
phenylacetate-CoA oxygenase/reductase PaaK; Identified by sequence similarity; putative.
     
  0.628
ENN85898.1
Hypothetical protein.
       0.581
argC
Putative arginine biosynthesis protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
       0.579
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
  
  0.452
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.441
rpsI
30S ribosomal protein S9; Identified by sequence similarity; putative; Belongs to the universal ribosomal protein uS9 family.
       0.441
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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