Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aqpZAquaporin Z; Identified by sequence similarity; putative; Belongs to the MIP/aquaporin (TC 1.A.8) family. (251 aa)    
Predicted Functional Partners:
glpK-2
Putative glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 0.917
glpK
Putative glycerol kinase; Identified by sequence similarity; putative.
  
 0.917
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.802
ENN87574.1
Putative transmembrane cyclic nucleotide-binding protein ion channel; Identified by sequence similarity; putative.
   
 0.785
ENN85632.1
Glycerol-3-phosphate dehydrogenase; Identified by sequence similarity; putative; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.781
glpD
Glycerol-3-phosphate dehydrogenase; Identified by sequence similarity; putative; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.781
ENN85778.1
Hypothetical protein.
    
   0.756
ENN85624.1
Putative glycerol-3-phosphate dehydrogenase; Identified by sequence similarity; putative.
  
  
 0.747
ENN88863.1
Hypothetical protein.
    
 0.745
ENN88844.1
Ankyrin; Identified by sequence similarity; putative.
    
 0.745
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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